STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT55197.1Putative amidophosphoribosyltransferase. (241 aa)    
Predicted Functional Partners:
KRT54109.1
DNA protecting protein DprA.
 
 
 0.923
KRT55933.1
DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.918
KRT55354.1
DNA replication and repair protein RadC; Belongs to the UPF0758 family.
 
    0.877
KRT53946.1
Mg chelatase-related protein.
 
  
 0.846
KRT56300.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.842
KRT55964.1
Prephenate dehydrogenase.
   
  
 0.813
KRT54584.1
TIGR00252 family protein; Belongs to the UPF0102 family.
 
    0.794
KRT53593.1
Signal transduction histidine kinase.
  
  
 0.792
KRT55836.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
   
    0.791
KRT54637.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
    0.778
Your Current Organism:
endosymbiont of Ridgeia
NCBI taxonomy Id: 54398
Other names: Ridgeia piscesae endosymbiont, e. of Ridgeia piscesae, endosymbiont of Ridgeia piscesae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.