STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT55202.1Hypothetical protein. (83 aa)    
Predicted Functional Partners:
KRT55203.1
Ni,Fe-hydrogenase I cytochrome b subunit.
       0.773
KRT54905.1
Vacuolar (H+)-ATPase G subunit.
  
     0.634
KRT54901.1
Archaeal/vacuolar-type H+-ATPase subunit F/Vma7.
  
     0.630
KRT54864.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.586
KRT55201.1
Uncharacterized membrane protein YozB, DUF420 family.
       0.576
KRT54900.1
Archaeal/vacuolar-type H+-ATPase subunit E/Vma4.
  
     0.572
KRT53890.1
Protoporphyrinogen oxidase.
  
     0.555
KRT56133.1
Hypothetical protein.
  
     0.553
KRT56183.1
Hypothetical protein.
  
     0.545
KRT54693.1
Oxygen tolerance.
  
     0.540
Your Current Organism:
endosymbiont of Ridgeia
NCBI taxonomy Id: 54398
Other names: Ridgeia piscesae endosymbiont, e. of Ridgeia piscesae, endosymbiont of Ridgeia piscesae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.