STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT55857.1PASTA domain. (396 aa)    
Predicted Functional Partners:
KRT55858.1
Hypothetical protein.
       0.773
KRT55859.1
Hypothetical protein.
       0.773
KRT55860.1
Hypothetical protein.
       0.773
KRT55856.1
Hypothetical protein.
       0.723
KRT55861.1
Hypothetical protein.
       0.648
KRT55862.1
Hypothetical protein.
       0.558
KRT55863.1
OmpA family.
       0.554
KRT55864.1
Tetratricopeptide repeat.
       0.492
KRT55865.1
Hypothetical protein.
       0.492
KRT55855.1
methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.447
Your Current Organism:
endosymbiont of Ridgeia
NCBI taxonomy Id: 54398
Other names: Ridgeia piscesae endosymbiont, e. of Ridgeia piscesae, endosymbiont of Ridgeia piscesae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.