STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT55918.1Hydrogenase maturation protein, carbamoyl dehydratase HypE. (335 aa)    
Predicted Functional Partners:
KRT55419.1
Hydrogenase maturation protein HypD; Belongs to the HypD family.
 
 
 0.998
KRT55814.1
[NiFe] hydrogenase maturation protein HypF.
 
 
 0.990
KRT55416.1
Hydrogenase maturation protein HypC.
 
 
 0.981
KRT55418.1
Hydrogenase nickel incorporation protein HypB.
 
  
 0.878
KRT55410.1
Ni,Fe-hydrogenase I large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
   
 0.837
KRT55413.1
Hydrogenase (NiFe) small subunit (hydA).
 
   
 0.820
KRT55417.1
Zn finger protein HypA/HybF (possibly regulating hydrogenase expression).
 
  
 0.797
KRT55415.1
Hydrogenase maturation protease.
 
   
 0.794
KRT55470.1
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
    
   0.729
KRT56376.1
Hypothetical protein; Contain, FlaG/YvyC family.
    
   0.729
Your Current Organism:
endosymbiont of Ridgeia
NCBI taxonomy Id: 54398
Other names: Ridgeia piscesae endosymbiont, e. of Ridgeia piscesae, endosymbiont of Ridgeia piscesae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.