STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT56413.1Hypothetical protein. (195 aa)    
Predicted Functional Partners:
cheD
Chemotaxis receptor (MCP) glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
     0.840
KRT53670.1
Hypothetical protein.
 
      0.789
KRT56414.1
STAS domain.
       0.781
KRT56415.1
Cellulose biosynthesis protein BcsQ.
       0.773
KRT56412.1
MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
     0.655
KRT56417.1
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor.
 
     0.590
KRT56612.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
     0.517
KRT55360.1
Putative membrane protein YfcA.
  
     0.502
KRT54604.1
Hypothetical protein.
  
     0.489
KRT56611.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
     0.488
Your Current Organism:
endosymbiont of Ridgeia
NCBI taxonomy Id: 54398
Other names: Ridgeia piscesae endosymbiont, e. of Ridgeia piscesae, endosymbiont of Ridgeia piscesae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.