STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT56545.1Hypothetical protein; Contains FIST_N domain. (379 aa)    
Predicted Functional Partners:
KRT56546.1
PAS domain S-box/diguanylate cyclase (GGDEF) domain.
 
    0.794
KRT56547.1
Hypothetical protein; Contains Mth938-like domain.
       0.727
KRT53738.1
Outer membrane protein (porin).
  
    0.694
KRT53653.1
PAS domain S-box.
 
  
 0.679
KRT56040.1
Heme NO binding.
 
   
 0.584
KRT55895.1
PAS domain S-box.
  
 
 0.571
KRT54924.1
Signal transduction histidine kinase.
 
  
 0.570
KRT54928.1
Response regulator receiver domain.
  
  
 0.570
KRT55230.1
Response regulator receiver domain.
  
  
 0.498
KRT55231.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
  
 0.498
Your Current Organism:
endosymbiont of Ridgeia
NCBI taxonomy Id: 54398
Other names: Ridgeia piscesae endosymbiont, e. of Ridgeia piscesae, endosymbiont of Ridgeia piscesae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.