STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT56557.1Succinate dehydrogenase subunit D. (108 aa)    
Predicted Functional Partners:
KRT56556.1
Succinate dehydrogenase subunit C.
 
 0.999
KRT56559.1
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
 
 0.998
KRT56088.1
Succinate dehydrogenase subunit C.
  
 0.993
KRT56558.1
Succinate dehydrogenase subunit A.
 
 0.993
KRT56090.1
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
 
 0.992
KRT54127.1
Dissimilatory adenylylsulfate reductase alpha subunit precursor.
  
 0.970
KRT56089.1
Succinate dehydrogenase subunit A.
  
 0.969
sucC
succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
 
 0.949
KRT55388.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.944
KRT56284.1
Succinyl-CoA synthetase, beta subunit.
  
 
 0.913
Your Current Organism:
endosymbiont of Ridgeia
NCBI taxonomy Id: 54398
Other names: Ridgeia piscesae endosymbiont, e. of Ridgeia piscesae, endosymbiont of Ridgeia piscesae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.