STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKZ19175.1DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)    
Predicted Functional Partners:
OKZ19176.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.974
BHV81_12725
Metalloprotease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.893
OKZ21328.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.874
BHV81_16135
Multidrug ABC transporter substrate-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.874
OKZ15147.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.874
OKZ15148.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.874
OKZ19178.1
Multidrug transporter AcrB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.710
OKZ19177.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.662
OKZ19179.1
Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.591
BHV81_00615
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.528
Your Current Organism:
Butyricimonas synergistica
NCBI taxonomy Id: 544644
Other names: B. synergistica, Butyricimonas synergistica Sakamoto et al. 2009 emend. Hahnke et al. 2016, Butyricimonas synergistica Sakamoto et al. 2009 emend. Sakamoto et al. 2014, CCUG 56610, DSM 23225, JCM 15148, Porphyromonadaceae bacterium JCM 15148, strain MT01
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