STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKZ17389.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (369 aa)    
Predicted Functional Partners:
OKZ17385.1
Capsule biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.816
OKZ17390.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.811
OKZ21147.1
UDP-N-acetyl-D-mannosamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.608
OKZ17381.1
UDP-N-acetyl-D-galactosamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.608
OKZ15021.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.518
OKZ20747.1
Energy transducer TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
     0.511
OKZ18425.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.503
OKZ17360.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.499
OKZ18703.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.478
OKZ17388.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.477
Your Current Organism:
Butyricimonas synergistica
NCBI taxonomy Id: 544644
Other names: B. synergistica, Butyricimonas synergistica Sakamoto et al. 2009 emend. Hahnke et al. 2016, Butyricimonas synergistica Sakamoto et al. 2009 emend. Sakamoto et al. 2014, CCUG 56610, DSM 23225, JCM 15148, Porphyromonadaceae bacterium JCM 15148, strain MT01
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