HCEG_00558 protein (Histoplasma capsulatum H88)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

HCEG_00558

Uncharacterized protein. (278 aa)

Predicted Functional Partners:

HCEG_02864

0.676

HCEG_06517

0.656

HCEG_03251

0.643

HCEG_04418

0.643

HCEG_05874

0.643

HCEG_05898

0.643

HCEG_00846

0.605

HCEG_02399

0.605

HCEG_03415

0.605

HCEG_05196

0.605

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00558	HCEG_00846	F0U4U2	F0U6E8	Uncharacterized protein.	Alpha-1,3 glucan synthase.	0.605
HCEG_00558	HCEG_02399	F0U4U2	F0UC84	Uncharacterized protein.	Alpha-amylase.	0.605
HCEG_00558	HCEG_02864	F0U4U2	F0UA87	Uncharacterized protein.	3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.	0.676
HCEG_00558	HCEG_03251	F0U4U2	F0UEX1	Uncharacterized protein.	Uncharacterized protein.	0.643
HCEG_00558	HCEG_03415	F0U4U2	F0UFU3	Uncharacterized protein.	Alpha-1,4 amylase.	0.605
HCEG_00558	HCEG_04418	F0U4U2	F0UGW4	Uncharacterized protein.	Isochorismatase family.	0.643
HCEG_00558	HCEG_05196	F0U4U2	F0UKM7	Uncharacterized protein.	Uncharacterized protein.	0.605
HCEG_00558	HCEG_05874	F0U4U2	F0UJX1	Uncharacterized protein.	Uncharacterized protein.	0.643
HCEG_00558	HCEG_05898	F0U4U2	F0UK48	Uncharacterized protein.	Predicted protein.	0.643
HCEG_00558	HCEG_06517	F0U4U2	F0UMF8	Uncharacterized protein.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.656
HCEG_00846	HCEG_00558	F0U6E8	F0U4U2	Alpha-1,3 glucan synthase.	Uncharacterized protein.	0.605
HCEG_02399	HCEG_00558	F0UC84	F0U4U2	Alpha-amylase.	Uncharacterized protein.	0.605
HCEG_02399	HCEG_03415	F0UC84	F0UFU3	Alpha-amylase.	Alpha-1,4 amylase.	0.920
HCEG_02864	HCEG_00558	F0UA87	F0U4U2	3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.	Uncharacterized protein.	0.676
HCEG_02864	HCEG_06517	F0UA87	F0UMF8	3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.903
HCEG_03251	HCEG_00558	F0UEX1	F0U4U2	Uncharacterized protein.	Uncharacterized protein.	0.643
HCEG_03251	HCEG_03415	F0UEX1	F0UFU3	Uncharacterized protein.	Alpha-1,4 amylase.	0.497
HCEG_03251	HCEG_05196	F0UEX1	F0UKM7	Uncharacterized protein.	Uncharacterized protein.	0.416
HCEG_03415	HCEG_00558	F0UFU3	F0U4U2	Alpha-1,4 amylase.	Uncharacterized protein.	0.605
HCEG_03415	HCEG_02399	F0UFU3	F0UC84	Alpha-1,4 amylase.	Alpha-amylase.	0.920