Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCEG_00054 | HCEG_00984 | F0U6Q3 | F0U7Q3 | PKHD-type hydroxylase TPA1. | HLH transcription factor. | 0.627 |
HCEG_00054 | HCEG_02142 | F0U6Q3 | F0UAR1 | PKHD-type hydroxylase TPA1. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.837 |
HCEG_00054 | HCEG_02381 | F0U6Q3 | F0UC66 | PKHD-type hydroxylase TPA1. | Uncharacterized protein. | 0.713 |
HCEG_00054 | HCEG_04422 | F0U6Q3 | F0UGW8 | PKHD-type hydroxylase TPA1. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.584 |
HCEG_00054 | HCEG_04692 | F0U6Q3 | F0UHW8 | PKHD-type hydroxylase TPA1. | N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | 0.617 |
HCEG_00054 | HCEG_05715 | F0U6Q3 | F0UJ03 | PKHD-type hydroxylase TPA1. | Ribosome biogenesis protein TSR1. | 0.612 |
HCEG_00054 | HCEG_05935 | F0U6Q3 | F0UKD9 | PKHD-type hydroxylase TPA1. | Elongation factor. | 0.994 |
HCEG_00054 | HCEG_07349 | F0U6Q3 | F0UMJ4 | PKHD-type hydroxylase TPA1. | Coproporphyrinogen III oxidase. | 0.637 |
HCEG_00054 | HCEG_08043 | F0U6Q3 | F0USF1 | PKHD-type hydroxylase TPA1. | Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. | 0.582 |
HCEG_00054 | HCEG_09066 | F0U6Q3 | F0UVC4 | PKHD-type hydroxylase TPA1. | Elongation factor 3. | 0.918 |
HCEG_00984 | HCEG_00054 | F0U7Q3 | F0U6Q3 | HLH transcription factor. | PKHD-type hydroxylase TPA1. | 0.627 |
HCEG_02142 | HCEG_00054 | F0UAR1 | F0U6Q3 | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | PKHD-type hydroxylase TPA1. | 0.837 |
HCEG_02142 | HCEG_04422 | F0UAR1 | F0UGW8 | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.863 |
HCEG_02142 | HCEG_08043 | F0UAR1 | F0USF1 | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. | 0.991 |
HCEG_02381 | HCEG_00054 | F0UC66 | F0U6Q3 | Uncharacterized protein. | PKHD-type hydroxylase TPA1. | 0.713 |
HCEG_04422 | HCEG_00054 | F0UGW8 | F0U6Q3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | PKHD-type hydroxylase TPA1. | 0.584 |
HCEG_04422 | HCEG_02142 | F0UGW8 | F0UAR1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.863 |
HCEG_04422 | HCEG_04692 | F0UGW8 | F0UHW8 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | 0.487 |
HCEG_04422 | HCEG_05715 | F0UGW8 | F0UJ03 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Ribosome biogenesis protein TSR1. | 0.695 |
HCEG_04422 | HCEG_05935 | F0UGW8 | F0UKD9 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Elongation factor. | 0.638 |
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