Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCEG_00240 | HCEG_00401 | F0U8C0 | F0U989 | DUF887 domain-containing protein. | 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | 0.579 |
HCEG_00240 | HCEG_01373 | F0U8C0 | F0U4R4 | DUF887 domain-containing protein. | Uncharacterized protein. | 0.520 |
HCEG_00240 | HCEG_02550 | F0U8C0 | F0UCQ9 | DUF887 domain-containing protein. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.527 |
HCEG_00240 | HCEG_03099 | F0U8C0 | F0UBI3 | DUF887 domain-containing protein. | Importin subunit alpha; Belongs to the importin alpha family. | 0.637 |
HCEG_00240 | HCEG_04272 | F0U8C0 | F0UG62 | DUF887 domain-containing protein. | Myosin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.577 |
HCEG_00240 | HCEG_05317 | F0U8C0 | F0UKZ8 | DUF887 domain-containing protein. | Predicted protein. | 0.596 |
HCEG_00240 | HCEG_05439 | F0U8C0 | F0ULF4 | DUF887 domain-containing protein. | Cysteine protease; Belongs to the peptidase C2 family. | 0.541 |
HCEG_00240 | HCEG_07409 | F0U8C0 | F0UQL7 | DUF887 domain-containing protein. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.577 |
HCEG_00240 | HCEG_08705 | F0U8C0 | F0UUB3 | DUF887 domain-containing protein. | Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. | 0.541 |
HCEG_00240 | HCEG_09007 | F0U8C0 | F0UV65 | DUF887 domain-containing protein. | Mis6 domain-containing protein. | 0.527 |
HCEG_00401 | HCEG_00240 | F0U989 | F0U8C0 | 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | DUF887 domain-containing protein. | 0.579 |
HCEG_00401 | HCEG_01373 | F0U989 | F0U4R4 | 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | Uncharacterized protein. | 0.507 |
HCEG_00401 | HCEG_02550 | F0U989 | F0UCQ9 | 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.517 |
HCEG_00401 | HCEG_03099 | F0U989 | F0UBI3 | 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | Importin subunit alpha; Belongs to the importin alpha family. | 0.507 |
HCEG_00401 | HCEG_04272 | F0U989 | F0UG62 | 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | Myosin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.577 |
HCEG_00401 | HCEG_05317 | F0U989 | F0UKZ8 | 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | Predicted protein. | 0.577 |
HCEG_00401 | HCEG_05439 | F0U989 | F0ULF4 | 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | Cysteine protease; Belongs to the peptidase C2 family. | 0.507 |
HCEG_00401 | HCEG_07409 | F0U989 | F0UQL7 | 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.577 |
HCEG_00401 | HCEG_08705 | F0U989 | F0UUB3 | 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. | 0.507 |
HCEG_00401 | HCEG_09007 | F0U989 | F0UV65 | 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | Mis6 domain-containing protein. | 0.517 |
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