STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCEG_01237AMP dependent synthetase and ligase. (683 aa)    
Predicted Functional Partners:
HCEG_00721
Methylmalonate-semialdehyde dehydrogenase.
   
 
 0.931
HCEG_02429
Acetyl-coenzyme A synthetase.
  
  
 
0.927
HCEG_02321
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 
 0.926
HCEG_02937
Acetate kinase.
   
 
 0.920
HCEG_00623
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.874
HCEG_00547
Retinal dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.845
HCEG_05979
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.845
HCEG_09070
Malate synthase; Belongs to the malate synthase family.
   
 0.840
HCEG_07416
Citrate synthase; Belongs to the citrate synthase family.
  
 0.836
HCEG_09064
Citrate synthase; Belongs to the citrate synthase family.
  
 0.836
Your Current Organism:
Histoplasma capsulatum H88
NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.