Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCEG_00849 | HCEG_01236 | F0U6Q8 | F0U9D2 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.958 |
HCEG_00849 | HCEG_01689 | F0U6Q8 | F0U6J9 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.958 |
HCEG_00849 | HCEG_03259 | F0U6Q8 | F0UEX9 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | 0.948 |
HCEG_00849 | HCEG_03934 | F0U6Q8 | F0UEI9 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Methylenetetrahydrofolate dehydrogenase. | 0.953 |
HCEG_00849 | HCEG_04637 | F0U6Q8 | F0UHL1 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Glycine dehydrogenase. | 0.855 |
HCEG_00849 | HCEG_04985 | F0U6Q8 | F0UJM7 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | C-1-tetrahydrofolate synthase. | 0.956 |
HCEG_00849 | HCEG_05413 | F0U6Q8 | F0ULC8 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Phosphoribosylglycinamide formyltransferase. | 0.769 |
HCEG_00849 | HCEG_06263 | F0U6Q8 | F0UPZ8 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.996 |
HCEG_00849 | HCEG_07850 | F0U6Q8 | F0URV8 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Thymidylate synthase. | 0.944 |
HCEG_00889 | HCEG_01236 | F0U6U8 | F0U9D2 | MTHFS protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.841 |
HCEG_00889 | HCEG_01689 | F0U6U8 | F0U6J9 | MTHFS protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.841 |
HCEG_00889 | HCEG_03934 | F0U6U8 | F0UEI9 | MTHFS protein. | Methylenetetrahydrofolate dehydrogenase. | 0.965 |
HCEG_00889 | HCEG_04985 | F0U6U8 | F0UJM7 | MTHFS protein. | C-1-tetrahydrofolate synthase. | 0.967 |
HCEG_00889 | HCEG_05413 | F0U6U8 | F0ULC8 | MTHFS protein. | Phosphoribosylglycinamide formyltransferase. | 0.950 |
HCEG_01236 | HCEG_00849 | F0U9D2 | F0U6Q8 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.958 |
HCEG_01236 | HCEG_00889 | F0U9D2 | F0U6U8 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | MTHFS protein. | 0.841 |
HCEG_01236 | HCEG_01689 | F0U9D2 | F0U6J9 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.919 |
HCEG_01236 | HCEG_03259 | F0U9D2 | F0UEX9 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | 0.987 |
HCEG_01236 | HCEG_03934 | F0U9D2 | F0UEI9 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Methylenetetrahydrofolate dehydrogenase. | 0.985 |
HCEG_01236 | HCEG_04637 | F0U9D2 | F0UHL1 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Glycine dehydrogenase. | 0.985 |
page 1 of 5