STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCEG_04361U3 small nucleolar RNA-associated protein. (571 aa)    
Predicted Functional Partners:
HCEG_01640
U3 snoRNP protein.
   
 0.999
HCEG_02475
Utp12 domain-containing protein.
   
 0.999
HCEG_03949
CBF/Mak21 family.
   
 0.999
HCEG_04207
WD40 repeat-containing protein.
   
 0.999
HCEG_03551
Nucleolar protein NOP58.
   
 0.999
HCEG_04704
Beta transducin.
   
 0.999
HCEG_05600
U3 snoRNA associated protein.
   
 0.999
HCEG_04846
Ribosomal RNA-processing protein.
  
 0.999
HCEG_05714
U3 snoRNP-associated protein Utp7.
   
 0.999
HCEG_06205
Periodic tryptophan protein.
   
0.999
Your Current Organism:
Histoplasma capsulatum H88
NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.