Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCEG_00854 | HCEG_02179 | F0U6R3 | F0UB01 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | GTP-binding protein. | 0.998 |
HCEG_00854 | HCEG_02183 | F0U6R3 | F0UB05 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 60S ribosomal protein. | 0.927 |
HCEG_00854 | HCEG_03628 | F0U6R3 | F0UH14 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.996 |
HCEG_00854 | HCEG_04281 | F0U6R3 | F0UG71 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 60S ribosomal protein. | 0.954 |
HCEG_00854 | HCEG_04519 | F0U6R3 | F0UHH0 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 60S ribosomal protein. | 0.991 |
HCEG_00854 | HCEG_04867 | F0U6R3 | F0UIU9 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Ribosomal large subunit. | 0.998 |
HCEG_00854 | HCEG_05991 | F0U6R3 | F0UNG1 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 60S ribosomal protein. | 0.919 |
HCEG_00854 | HCEG_07209 | F0U6R3 | F0ULP6 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 50S ribosomal subunit. | 0.905 |
HCEG_00854 | NOP7 | F0U6R3 | F0U4H7 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.998 |
HCEG_01554 | HCEG_02183 | F0U5V7 | F0UB05 | Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. | 60S ribosomal protein. | 0.997 |
HCEG_01554 | HCEG_03628 | F0U5V7 | F0UH14 | Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.996 |
HCEG_01554 | HCEG_04281 | F0U5V7 | F0UG71 | Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. | 60S ribosomal protein. | 0.998 |
HCEG_01554 | HCEG_04519 | F0U5V7 | F0UHH0 | Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. | 60S ribosomal protein. | 0.998 |
HCEG_01554 | HCEG_05991 | F0U5V7 | F0UNG1 | Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. | 60S ribosomal protein. | 0.998 |
HCEG_01554 | HCEG_07209 | F0U5V7 | F0ULP6 | Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. | 50S ribosomal subunit. | 0.998 |
HCEG_02179 | HCEG_00854 | F0UB01 | F0U6R3 | GTP-binding protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.998 |
HCEG_02179 | HCEG_02183 | F0UB01 | F0UB05 | GTP-binding protein. | 60S ribosomal protein. | 0.913 |
HCEG_02179 | HCEG_03628 | F0UB01 | F0UH14 | GTP-binding protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.996 |
HCEG_02179 | HCEG_04281 | F0UB01 | F0UG71 | GTP-binding protein. | 60S ribosomal protein. | 0.945 |
HCEG_02179 | HCEG_04519 | F0UB01 | F0UHH0 | GTP-binding protein. | 60S ribosomal protein. | 0.985 |
page 1 of 6