Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCEG_00183 | HCEG_01441 | F0U7Z9 | F0U588 | Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family. | Outer mitochondrial membrane porin protein. | 0.633 |
HCEG_00183 | HCEG_04433 | F0U7Z9 | F0UH31 | Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family. | S import receptor. | 0.751 |
HCEG_00183 | HCEG_05983 | F0U7Z9 | F0UNF3 | Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family. | Mitochondrial import receptor subunit tom-20. | 0.760 |
HCEG_00183 | HCEG_08447 | F0U7Z9 | F0UTK5 | Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family. | Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. | 0.658 |
HCEG_01441 | HCEG_00183 | F0U588 | F0U7Z9 | Outer mitochondrial membrane porin protein. | Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family. | 0.633 |
HCEG_01441 | HCEG_01847 | F0U588 | F0U7X3 | Outer mitochondrial membrane porin protein. | Ubiquitin C-terminal hydrolase Ubp8; Belongs to the peptidase C19 family. | 0.652 |
HCEG_01441 | HCEG_03617 | F0U588 | F0UH03 | Outer mitochondrial membrane porin protein. | Ubiquitin C-terminal hydrolase; Belongs to the peptidase C19 family. | 0.664 |
HCEG_01441 | HCEG_04433 | F0U588 | F0UH31 | Outer mitochondrial membrane porin protein. | S import receptor. | 0.873 |
HCEG_01441 | HCEG_05983 | F0U588 | F0UNF3 | Outer mitochondrial membrane porin protein. | Mitochondrial import receptor subunit tom-20. | 0.924 |
HCEG_01441 | HCEG_07196 | F0U588 | F0ULN3 | Outer mitochondrial membrane porin protein. | Mitochondrial import receptor subunit tom22. | 0.765 |
HCEG_01441 | HCEG_07522 | F0U588 | F0UQY0 | Outer mitochondrial membrane porin protein. | Mitochondrial import receptor subunit TOM40. | 0.959 |
HCEG_01441 | HCEG_07877 | F0U588 | F0URY5 | Outer mitochondrial membrane porin protein. | Mitochondrial import receptor subunit. | 0.559 |
HCEG_01441 | HCEG_08447 | F0U588 | F0UTK5 | Outer mitochondrial membrane porin protein. | Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. | 0.820 |
HCEG_01847 | HCEG_01441 | F0U7X3 | F0U588 | Ubiquitin C-terminal hydrolase Ubp8; Belongs to the peptidase C19 family. | Outer mitochondrial membrane porin protein. | 0.652 |
HCEG_01847 | HCEG_04433 | F0U7X3 | F0UH31 | Ubiquitin C-terminal hydrolase Ubp8; Belongs to the peptidase C19 family. | S import receptor. | 0.751 |
HCEG_01847 | HCEG_05983 | F0U7X3 | F0UNF3 | Ubiquitin C-terminal hydrolase Ubp8; Belongs to the peptidase C19 family. | Mitochondrial import receptor subunit tom-20. | 0.760 |
HCEG_01847 | HCEG_08447 | F0U7X3 | F0UTK5 | Ubiquitin C-terminal hydrolase Ubp8; Belongs to the peptidase C19 family. | Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. | 0.658 |
HCEG_03617 | HCEG_01441 | F0UH03 | F0U588 | Ubiquitin C-terminal hydrolase; Belongs to the peptidase C19 family. | Outer mitochondrial membrane porin protein. | 0.664 |
HCEG_03617 | HCEG_04433 | F0UH03 | F0UH31 | Ubiquitin C-terminal hydrolase; Belongs to the peptidase C19 family. | S import receptor. | 0.803 |
HCEG_03617 | HCEG_05983 | F0UH03 | F0UNF3 | Ubiquitin C-terminal hydrolase; Belongs to the peptidase C19 family. | Mitochondrial import receptor subunit tom-20. | 0.850 |
page 1 of 4