Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCEG_02739 | HCEG_02860 | F0UDE0 | F0UA83 | Predicted protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.909 |
HCEG_02739 | HCEG_03485 | F0UDE0 | F0UGB7 | Predicted protein. | Chromatin binding protein. | 0.840 |
HCEG_02739 | HCEG_03486 | F0UDE0 | F0UGB8 | Predicted protein. | Uncharacterized protein. | 0.840 |
HCEG_02739 | HCEG_03792 | F0UDE0 | F0UE47 | Predicted protein. | Predicted protein. | 0.909 |
HCEG_02739 | HCEG_04228 | F0UDE0 | F0UFW4 | Predicted protein. | Histone H2B; Belongs to the histone H2B family. | 0.955 |
HCEG_02739 | HCEG_04229 | F0UDE0 | F0UFW5 | Predicted protein. | Histone H2A; Belongs to the histone H2A family. | 0.865 |
HCEG_02739 | HCEG_04679 | F0UDE0 | F0UHV5 | Predicted protein. | Set1 complex component. | 0.884 |
HCEG_02739 | HCEG_05834 | F0UDE0 | F0UJT1 | Predicted protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.865 |
HCEG_02739 | HCEG_06288 | F0UDE0 | F0UQ23 | Predicted protein. | Uncharacterized protein. | 0.682 |
HCEG_02800 | HCEG_02860 | F0U9X2 | F0UA83 | GRF zinc finger domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.909 |
HCEG_02800 | HCEG_03485 | F0U9X2 | F0UGB7 | GRF zinc finger domain-containing protein. | Chromatin binding protein. | 0.840 |
HCEG_02800 | HCEG_03486 | F0U9X2 | F0UGB8 | GRF zinc finger domain-containing protein. | Uncharacterized protein. | 0.840 |
HCEG_02800 | HCEG_03792 | F0U9X2 | F0UE47 | GRF zinc finger domain-containing protein. | Predicted protein. | 0.909 |
HCEG_02800 | HCEG_04228 | F0U9X2 | F0UFW4 | GRF zinc finger domain-containing protein. | Histone H2B; Belongs to the histone H2B family. | 0.955 |
HCEG_02800 | HCEG_04229 | F0U9X2 | F0UFW5 | GRF zinc finger domain-containing protein. | Histone H2A; Belongs to the histone H2A family. | 0.865 |
HCEG_02800 | HCEG_04679 | F0U9X2 | F0UHV5 | GRF zinc finger domain-containing protein. | Set1 complex component. | 0.884 |
HCEG_02800 | HCEG_05834 | F0U9X2 | F0UJT1 | GRF zinc finger domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.865 |
HCEG_02800 | HCEG_06288 | F0U9X2 | F0UQ23 | GRF zinc finger domain-containing protein. | Uncharacterized protein. | 0.682 |
HCEG_02860 | HCEG_02739 | F0UA83 | F0UDE0 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Predicted protein. | 0.909 |
HCEG_02860 | HCEG_02800 | F0UA83 | F0U9X2 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | GRF zinc finger domain-containing protein. | 0.909 |
page 1 of 6