Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCEG_00840 | HCEG_01419 | F0U6E2 | F0U514 | Uncharacterized protein. | Uncharacterized protein. | 0.497 |
HCEG_00840 | HCEG_01476 | F0U6E2 | F0U5C3 | Uncharacterized protein. | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | 0.687 |
HCEG_00840 | HCEG_06687 | F0U6E2 | F0UN05 | Uncharacterized protein. | Paxneb protein superfamily. | 0.567 |
HCEG_00840 | HCEG_07525 | F0U6E2 | F0UQY3 | Uncharacterized protein. | RNA polymerase II 90 kDa subunit. | 0.687 |
HCEG_00840 | HCEG_08072 | F0U6E2 | F0USI0 | Uncharacterized protein. | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | 0.793 |
HCEG_00840 | HCEG_08367 | F0U6E2 | F0UTC5 | Uncharacterized protein. | Riboflavin aldehyde-forming enzyme. | 0.497 |
HCEG_00840 | HCEG_09012 | F0U6E2 | F0UV70 | Uncharacterized protein. | Uncharacterized protein. | 0.676 |
HCEG_00840 | NCS6 | F0U6E2 | F0UUX2 | Uncharacterized protein. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | 0.451 |
HCEG_01419 | HCEG_00840 | F0U514 | F0U6E2 | Uncharacterized protein. | Uncharacterized protein. | 0.497 |
HCEG_01419 | HCEG_01476 | F0U514 | F0U5C3 | Uncharacterized protein. | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | 0.889 |
HCEG_01419 | HCEG_06687 | F0U514 | F0UN05 | Uncharacterized protein. | Paxneb protein superfamily. | 0.933 |
HCEG_01419 | HCEG_07007 | F0U514 | F0UPJ3 | Uncharacterized protein. | Toxin-insensitive protein. | 0.497 |
HCEG_01419 | HCEG_07525 | F0U514 | F0UQY3 | Uncharacterized protein. | RNA polymerase II 90 kDa subunit. | 0.863 |
HCEG_01419 | HCEG_08072 | F0U514 | F0USI0 | Uncharacterized protein. | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | 0.888 |
HCEG_01419 | NCS6 | F0U514 | F0UUX2 | Uncharacterized protein. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | 0.537 |
HCEG_01476 | HCEG_00840 | F0U5C3 | F0U6E2 | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | Uncharacterized protein. | 0.687 |
HCEG_01476 | HCEG_01419 | F0U5C3 | F0U514 | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | Uncharacterized protein. | 0.889 |
HCEG_01476 | HCEG_06687 | F0U5C3 | F0UN05 | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | Paxneb protein superfamily. | 0.992 |
HCEG_01476 | HCEG_07007 | F0U5C3 | F0UPJ3 | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | Toxin-insensitive protein. | 0.687 |
HCEG_01476 | HCEG_07525 | F0U5C3 | F0UQY3 | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | RNA polymerase II 90 kDa subunit. | 0.994 |
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