STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCEG_08254WD40 repeat-containing protein. (1473 aa)    
Predicted Functional Partners:
HCEG_00434
tRNA splicing 2' phosphotransferase.
    
 0.999
HCEG_01345
Protein transporter SEC13; Belongs to the WD repeat SEC13 family.
    
 0.998
HCEG_00841
Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.
    
 0.998
HCEG_05216
WD40 repeat-containing protein.
    
0.998
HCEG_02280
Uncharacterized protein.
  
 
 0.997
HCEG_05539
Nitrogen permease regulator family.
    
 0.997
HCEG_06725
Vacuolar membrane-associated protein IML1.
   
 0.997
HCEG_02743
Uncharacterized protein.
    
 0.974
HCEG_03653
Mitochondrial inner membrane protease subunit.
    
 0.965
HCEG_06172
Methyltranfer_dom domain-containing protein.
    
 0.834
Your Current Organism:
Histoplasma capsulatum H88
NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.