Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BNA1 | HCEG_08531 | F0UED0 | F0UTT9 | 3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate. | Uncharacterized protein. | 0.401 |
HCEG_02471 | HCEG_03255 | F0UCI0 | F0UEX5 | 4-hydroxyphenylpyruvate dioxygenase. | Fumarylacetoacetase. | 0.692 |
HCEG_02471 | HCEG_08530 | F0UCI0 | F0UTT8 | 4-hydroxyphenylpyruvate dioxygenase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.919 |
HCEG_02471 | HCEG_08531 | F0UCI0 | F0UTT9 | 4-hydroxyphenylpyruvate dioxygenase. | Uncharacterized protein. | 0.557 |
HCEG_02471 | HCEG_08532 | F0UCI0 | F0UTU0 | 4-hydroxyphenylpyruvate dioxygenase. | Homogentisate 1,2-dioxygenase. | 0.993 |
HCEG_03255 | HCEG_02471 | F0UEX5 | F0UCI0 | Fumarylacetoacetase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.692 |
HCEG_03255 | HCEG_08530 | F0UEX5 | F0UTT8 | Fumarylacetoacetase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.691 |
HCEG_03255 | HCEG_08531 | F0UEX5 | F0UTT9 | Fumarylacetoacetase. | Uncharacterized protein. | 0.619 |
HCEG_03255 | HCEG_08532 | F0UEX5 | F0UTU0 | Fumarylacetoacetase. | Homogentisate 1,2-dioxygenase. | 0.916 |
HCEG_08530 | HCEG_02471 | F0UTT8 | F0UCI0 | 4-hydroxyphenylpyruvate dioxygenase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.919 |
HCEG_08530 | HCEG_03255 | F0UTT8 | F0UEX5 | 4-hydroxyphenylpyruvate dioxygenase. | Fumarylacetoacetase. | 0.691 |
HCEG_08530 | HCEG_08531 | F0UTT8 | F0UTT9 | 4-hydroxyphenylpyruvate dioxygenase. | Uncharacterized protein. | 0.557 |
HCEG_08530 | HCEG_08532 | F0UTT8 | F0UTU0 | 4-hydroxyphenylpyruvate dioxygenase. | Homogentisate 1,2-dioxygenase. | 0.993 |
HCEG_08531 | BNA1 | F0UTT9 | F0UED0 | Uncharacterized protein. | 3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate. | 0.401 |
HCEG_08531 | HCEG_02471 | F0UTT9 | F0UCI0 | Uncharacterized protein. | 4-hydroxyphenylpyruvate dioxygenase. | 0.557 |
HCEG_08531 | HCEG_03255 | F0UTT9 | F0UEX5 | Uncharacterized protein. | Fumarylacetoacetase. | 0.619 |
HCEG_08531 | HCEG_08530 | F0UTT9 | F0UTT8 | Uncharacterized protein. | 4-hydroxyphenylpyruvate dioxygenase. | 0.557 |
HCEG_08531 | HCEG_08532 | F0UTT9 | F0UTU0 | Uncharacterized protein. | Homogentisate 1,2-dioxygenase. | 0.655 |
HCEG_08532 | HCEG_02471 | F0UTU0 | F0UCI0 | Homogentisate 1,2-dioxygenase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.993 |
HCEG_08532 | HCEG_03255 | F0UTU0 | F0UEX5 | Homogentisate 1,2-dioxygenase. | Fumarylacetoacetase. | 0.916 |
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