STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCEG_08576CCR4-NOT core complex subunit Not4. (1526 aa)    
Predicted Functional Partners:
HCEG_00285
Ccr4-Not transcription complex subunit.
    
 0.999
HCEG_02490
Cell differentiation protein.
    
 0.998
HCEG_04173
CCR4-NOT transcription complex.
   
 0.996
HCEG_03999
CCR4-NOT transcription complex.
    
 0.994
HCEG_00708
Glucose-repressible alcohol dehydrogenase.
    
 0.990
HCEG_02066
ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family.
    
 0.974
HCEG_01903
NOT2 family protein.
    
 0.972
HCEG_01897
AMFR protein.
    
 0.958
HCEG_06751
Topisomerase II associated protein.
    
 
 0.952
HCEG_01480
ATP-dependent RNA helicase DOB1.
    
 
 0.933
Your Current Organism:
Histoplasma capsulatum H88
NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.