STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCDG_00873Uncharacterized protein. (171 aa)    
Predicted Functional Partners:
HCDG_09292
DUF4203 domain-containing protein.
    
  0.587
HCDG_05851
Ubiquitin-like domain-containing protein.
    
  0.552
HCDG_03235
Transcription factor tfiiic complex subunit sfc4.
    
  0.548
HCDG_03807
Uncharacterized protein.
    
  0.535
HCDG_05371
Sulfur metabolite repression control protein C; Belongs to the SKP1 family.
    
  0.535
HCDG_01581
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.528
HCDG_05925
Histone acetylase complex subunit.
    
  0.520
HCDG_05382
Uncharacterized protein.
    
  0.506
HCDG_01962
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
  0.499
HCDG_01500
BZIP domain-containing protein.
    
  0.486
Your Current Organism:
Histoplasma capsulatum H143
NCBI taxonomy Id: 544712
Other names: Ajellomyces capsulatus H143, H. capsulatum H143
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.