Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCDG_01098 | HCDG_01334 | C6H316 | C6H413 | DUF3543 domain-containing protein. | Atg29_N domain-containing protein. | 0.479 |
HCDG_01098 | HCDG_04200 | C6H316 | C6HDB9 | DUF3543 domain-containing protein. | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | 0.999 |
HCDG_01098 | HCDG_06535 | C6H316 | C6HK04 | DUF3543 domain-containing protein. | Kinase activator. | 0.975 |
HCDG_01334 | HCDG_01098 | C6H413 | C6H316 | Atg29_N domain-containing protein. | DUF3543 domain-containing protein. | 0.479 |
HCDG_01334 | HCDG_04200 | C6H413 | C6HDB9 | Atg29_N domain-containing protein. | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | 0.659 |
HCDG_01334 | HCDG_06535 | C6H413 | C6HK04 | Atg29_N domain-containing protein. | Kinase activator. | 0.641 |
HCDG_04200 | HCDG_01098 | C6HDB9 | C6H316 | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | DUF3543 domain-containing protein. | 0.999 |
HCDG_04200 | HCDG_01334 | C6HDB9 | C6H413 | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | Atg29_N domain-containing protein. | 0.659 |
HCDG_04200 | HCDG_06535 | C6HDB9 | C6HK04 | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | Kinase activator. | 0.997 |
HCDG_06535 | HCDG_01098 | C6HK04 | C6H316 | Kinase activator. | DUF3543 domain-containing protein. | 0.975 |
HCDG_06535 | HCDG_01334 | C6HK04 | C6H413 | Kinase activator. | Atg29_N domain-containing protein. | 0.641 |
HCDG_06535 | HCDG_04200 | C6HK04 | C6HDB9 | Kinase activator. | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | 0.997 |