STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCDG_02069Cytosolic large ribosomal subunit protein L7A. (398 aa)    
Predicted Functional Partners:
HCDG_00613
60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
  
 0.999
HCDG_00061
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.999
HCDG_01278
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.999
HCDG_01297
Ribosomal protein Srp1.
   
 0.999
HCDG_01298
40S ribosomal protein S9.
  
 0.999
HCDG_00185
60S ribosomal protein L33.
   
 0.999
HCDG_00303
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
  
 0.999
HCDG_00323
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
HCDG_00341
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.999
HCDG_01694
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.999
Your Current Organism:
Histoplasma capsulatum H143
NCBI taxonomy Id: 544712
Other names: Ajellomyces capsulatus H143, H. capsulatum H143
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.