STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCDG_02103Protein transporter sec24. (864 aa)    
Predicted Functional Partners:
HCDG_02294
Sec23/Sec24 family protein.
   
0.999
HCDG_03182
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.999
HCDG_01962
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.998
HCDG_01979
SNARE sec22; Belongs to the synaptobrevin family.
    
 0.998
HCDG_01491
SNARE SEC13; Belongs to the WD repeat SEC13 family.
   
 0.998
HCDG_06429
SNARE SEC31.
   
 0.985
HCDG_06430
SNARE SEC31.
   
 0.985
HCDG_02732
Uncharacterized protein.
   
 0.983
HCDG_03243
Small COPII coat GTPase sar1; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.955
HCDG_03244
Uncharacterized protein.
   
 0.955
Your Current Organism:
Histoplasma capsulatum H143
NCBI taxonomy Id: 544712
Other names: Ajellomyces capsulatus H143, H. capsulatum H143
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