STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCDG_02315Exosome complex exonuclease RRP6. (671 aa)    
Predicted Functional Partners:
HCDG_02214
WD40 domain-containing protein.
   
 0.964
HCDG_05627
Cytosolic regulator Pianissimo.
   
 0.962
HCDG_00880
WD40 domain-containing protein.
    
 0.960
HCDG_06568
Stress-activated map kinase-interacting protein.
    
 0.960
HCDG_00896
Mitotic control protein dis3; Belongs to the RNR ribonuclease family.
    
 0.953
HCDG_04898
Uncharacterized protein.
    
 0.949
HCDG_07699
Gtr1/RagA G protein.
    
 0.941
HCDG_08971
3' exoribonuclease.
    
  0.941
HCDG_03034
Telomere_reg-2 domain-containing protein.
    
 0.921
HCDG_01098
DUF3543 domain-containing protein.
    
 0.916
Your Current Organism:
Histoplasma capsulatum H143
NCBI taxonomy Id: 544712
Other names: Ajellomyces capsulatus H143, H. capsulatum H143
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.