Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCDG_01226 | HCDG_01598 | C6H3H3 | C6H837 | Nitrate reductase. | C2H2 finger domain-containing protein. | 0.677 |
HCDG_01226 | HCDG_04808 | C6H3H3 | C6HEE1 | Nitrate reductase. | Nucleoside diphosphate kinase. | 0.403 |
HCDG_01226 | HCDG_05280 | C6H3H3 | C6HFU0 | Nitrate reductase. | Nitrate reductase. | 0.981 |
HCDG_01226 | HCDG_05281 | C6H3H3 | C6HFU1 | Nitrate reductase. | Nitrate reductase. | 0.981 |
HCDG_01598 | HCDG_01226 | C6H837 | C6H3H3 | C2H2 finger domain-containing protein. | Nitrate reductase. | 0.677 |
HCDG_01598 | HCDG_02227 | C6H837 | C6H726 | C2H2 finger domain-containing protein. | Mitochondrial 40S ribosomal protein MRP2. | 0.651 |
HCDG_01598 | HCDG_02357 | C6H837 | C6H7F6 | C2H2 finger domain-containing protein. | Mitochondrial ribosomal protein subunit S2. | 0.653 |
HCDG_01598 | HCDG_02735 | C6H837 | C6H954 | C2H2 finger domain-containing protein. | 37S ribosomal protein Mrp17. | 0.651 |
HCDG_01598 | HCDG_04808 | C6H837 | C6HEE1 | C2H2 finger domain-containing protein. | Nucleoside diphosphate kinase. | 0.650 |
HCDG_01598 | HCDG_05256 | C6H837 | C6HFR6 | C2H2 finger domain-containing protein. | 37S ribosomal protein S16. | 0.651 |
HCDG_01598 | HCDG_05280 | C6H837 | C6HFU0 | C2H2 finger domain-containing protein. | Nitrate reductase. | 0.677 |
HCDG_01598 | HCDG_05281 | C6H837 | C6HFU1 | C2H2 finger domain-containing protein. | Nitrate reductase. | 0.677 |
HCDG_01598 | HCDG_05632 | C6H837 | C6HHF1 | C2H2 finger domain-containing protein. | 40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. | 0.664 |
HCDG_01598 | HCDG_05785 | C6H837 | C6HHV4 | C2H2 finger domain-containing protein. | 40S ribosomal protein S9. | 0.651 |
HCDG_02227 | HCDG_01598 | C6H726 | C6H837 | Mitochondrial 40S ribosomal protein MRP2. | C2H2 finger domain-containing protein. | 0.651 |
HCDG_02227 | HCDG_02357 | C6H726 | C6H7F6 | Mitochondrial 40S ribosomal protein MRP2. | Mitochondrial ribosomal protein subunit S2. | 0.999 |
HCDG_02227 | HCDG_02735 | C6H726 | C6H954 | Mitochondrial 40S ribosomal protein MRP2. | 37S ribosomal protein Mrp17. | 0.999 |
HCDG_02227 | HCDG_04808 | C6H726 | C6HEE1 | Mitochondrial 40S ribosomal protein MRP2. | Nucleoside diphosphate kinase. | 0.998 |
HCDG_02227 | HCDG_05256 | C6H726 | C6HFR6 | Mitochondrial 40S ribosomal protein MRP2. | 37S ribosomal protein S16. | 0.999 |
HCDG_02227 | HCDG_05632 | C6H726 | C6HHF1 | Mitochondrial 40S ribosomal protein MRP2. | 40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
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