STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCDG_02503Uncharacterized protein. (227 aa)    
Predicted Functional Partners:
HCDG_05046
GTP-binding protein.
   
  0.688
HCDG_00561
Uncharacterized protein.
   
  0.669
HCDG_01362
Small GTPase.
   
  0.669
HCDG_01577
Uncharacterized protein.
   
  0.669
HCDG_01657
Rho1 GTPase.
   
  0.669
HCDG_07556
Rac1 GTPase.
   
  0.669
HCDG_07623
Rho3 protein.
   
  0.669
HCDG_07624
Uncharacterized protein.
   
  0.669
HCDG_07393
Rho3 GTPase.
   
  0.669
HCDG_00514
Profilin; Belongs to the profilin family.
    
 0.658
Your Current Organism:
Histoplasma capsulatum H143
NCBI taxonomy Id: 544712
Other names: Ajellomyces capsulatus H143, H. capsulatum H143
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.