STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCDG_03978Polyamine transporter 4. (517 aa)    
Predicted Functional Partners:
HCDG_08643
PHD finger containing protein Phf1.
    
 0.595
HCDG_04003
RNA polymerase subunit.
    
  0.589
HCDG_07195
DNA-directed RNA polymerase I.
    
  0.589
HCDG_01170
Delta-9 fatty acid desaturase.
    
 0.567
HCDG_01171
Delta-9 fatty acid desaturase; Belongs to the cytochrome b5 family.
    
 0.567
HCDG_04348
RNA polymerase II subunit 3.
    
  0.565
HCDG_07034
Uncharacterized protein.
    
  0.550
HCDG_07035
RNA polymerase II subunit 7.
    
  0.550
HCDG_03422
DNA-directed RNA polymerase II.
    
  0.549
HCDG_06073
Metallothionein-I gene transcription activator.
    
  0.549
Your Current Organism:
Histoplasma capsulatum H143
NCBI taxonomy Id: 544712
Other names: Ajellomyces capsulatus H143, H. capsulatum H143
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.