Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCDG_00726 | HCDG_01626 | C6H1Z4 | C6H865 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.458 |
HCDG_00726 | HCDG_01906 | C6H1Z4 | C6H655 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | N-acetyl-gamma-glutamyl-phosphate reductase; In the N-terminal section; belongs to the acetylglutamate kinase family. | 0.646 |
HCDG_00726 | HCDG_03701 | C6H1Z4 | C6HCF2 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Argininosuccinate synthetase. | 0.878 |
HCDG_00726 | HCDG_04256 | C6H1Z4 | C6HDH5 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | WD repeat protein. | 0.808 |
HCDG_00726 | HCDG_06263 | C6H1Z4 | C6HIB3 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Orotate reductase. | 0.464 |
HCDG_00726 | HCDG_07867 | C6H1Z4 | C6HNT6 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Histidine biosynthesis trifunctional protein. | 0.627 |
HCDG_00726 | HCDG_09319 | C6H1Z4 | C6HSY8 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate. | 0.585 |
HCDG_01626 | HCDG_00726 | C6H865 | C6H1Z4 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.458 |
HCDG_01626 | HCDG_01906 | C6H865 | C6H655 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | N-acetyl-gamma-glutamyl-phosphate reductase; In the N-terminal section; belongs to the acetylglutamate kinase family. | 0.989 |
HCDG_01626 | HCDG_02245 | C6H865 | C6H744 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Allantoinase. | 0.495 |
HCDG_01626 | HCDG_03701 | C6H865 | C6HCF2 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Argininosuccinate synthetase. | 0.995 |
HCDG_01626 | HCDG_04256 | C6H865 | C6HDH5 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | WD repeat protein. | 0.764 |
HCDG_01626 | HCDG_07867 | C6H865 | C6HNT6 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Histidine biosynthesis trifunctional protein. | 0.547 |
HCDG_01626 | HCDG_09319 | C6H865 | C6HSY8 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate. | 0.962 |
HCDG_01906 | HCDG_00726 | C6H655 | C6H1Z4 | N-acetyl-gamma-glutamyl-phosphate reductase; In the N-terminal section; belongs to the acetylglutamate kinase family. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.646 |
HCDG_01906 | HCDG_01626 | C6H655 | C6H865 | N-acetyl-gamma-glutamyl-phosphate reductase; In the N-terminal section; belongs to the acetylglutamate kinase family. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.989 |
HCDG_01906 | HCDG_02245 | C6H655 | C6H744 | N-acetyl-gamma-glutamyl-phosphate reductase; In the N-terminal section; belongs to the acetylglutamate kinase family. | Allantoinase. | 0.467 |
HCDG_01906 | HCDG_02733 | C6H655 | C6H952 | N-acetyl-gamma-glutamyl-phosphate reductase; In the N-terminal section; belongs to the acetylglutamate kinase family. | Glucosamine 6-phosphate synthetase. | 0.516 |
HCDG_01906 | HCDG_03701 | C6H655 | C6HCF2 | N-acetyl-gamma-glutamyl-phosphate reductase; In the N-terminal section; belongs to the acetylglutamate kinase family. | Argininosuccinate synthetase. | 0.983 |
HCDG_01906 | HCDG_04256 | C6H655 | C6HDH5 | N-acetyl-gamma-glutamyl-phosphate reductase; In the N-terminal section; belongs to the acetylglutamate kinase family. | WD repeat protein. | 0.956 |
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