Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCDG_00024 | HCDG_00532 | C6H3D0 | C6H1F0 | Glyceraldehyde-3-phosphate dehydrogenase. | Cytochrome b2. | 0.411 |
HCDG_00024 | HCDG_01610 | C6H3D0 | C6H849 | Glyceraldehyde-3-phosphate dehydrogenase. | Cytochrome b2. | 0.411 |
HCDG_00024 | HCDG_04328 | C6H3D0 | C6HDP7 | Glyceraldehyde-3-phosphate dehydrogenase. | Retrograde regulation protein. | 0.471 |
HCDG_00024 | HCDG_04329 | C6H3D0 | C6HDP8 | Glyceraldehyde-3-phosphate dehydrogenase. | Retrograde regulation protein. | 0.471 |
HCDG_00024 | HCDG_08741 | C6H3D0 | C6HQR9 | Glyceraldehyde-3-phosphate dehydrogenase. | L-lactate ferricytochrome c oxidoreductase; Belongs to the cytochrome b5 family. | 0.411 |
HCDG_00532 | HCDG_00024 | C6H1F0 | C6H3D0 | Cytochrome b2. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.411 |
HCDG_00532 | HCDG_01610 | C6H1F0 | C6H849 | Cytochrome b2. | Cytochrome b2. | 0.917 |
HCDG_00532 | HCDG_04328 | C6H1F0 | C6HDP7 | Cytochrome b2. | Retrograde regulation protein. | 0.400 |
HCDG_00532 | HCDG_04329 | C6H1F0 | C6HDP8 | Cytochrome b2. | Retrograde regulation protein. | 0.400 |
HCDG_00532 | HCDG_08741 | C6H1F0 | C6HQR9 | Cytochrome b2. | L-lactate ferricytochrome c oxidoreductase; Belongs to the cytochrome b5 family. | 0.627 |
HCDG_01610 | HCDG_00024 | C6H849 | C6H3D0 | Cytochrome b2. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.411 |
HCDG_01610 | HCDG_00532 | C6H849 | C6H1F0 | Cytochrome b2. | Cytochrome b2. | 0.917 |
HCDG_01610 | HCDG_04328 | C6H849 | C6HDP7 | Cytochrome b2. | Retrograde regulation protein. | 0.400 |
HCDG_01610 | HCDG_04329 | C6H849 | C6HDP8 | Cytochrome b2. | Retrograde regulation protein. | 0.400 |
HCDG_01610 | HCDG_08741 | C6H849 | C6HQR9 | Cytochrome b2. | L-lactate ferricytochrome c oxidoreductase; Belongs to the cytochrome b5 family. | 0.596 |
HCDG_02616 | HCDG_04328 | C6H8T5 | C6HDP7 | UBX domain-containing protein. | Retrograde regulation protein. | 0.466 |
HCDG_02616 | HCDG_04329 | C6H8T5 | C6HDP8 | UBX domain-containing protein. | Retrograde regulation protein. | 0.466 |
HCDG_04328 | HCDG_00024 | C6HDP7 | C6H3D0 | Retrograde regulation protein. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.471 |
HCDG_04328 | HCDG_00532 | C6HDP7 | C6H1F0 | Retrograde regulation protein. | Cytochrome b2. | 0.400 |
HCDG_04328 | HCDG_01610 | C6HDP7 | C6H849 | Retrograde regulation protein. | Cytochrome b2. | 0.400 |
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