Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCDG_00230 | HCDG_02275 | C6H4M9 | C6H774 | Uncharacterized protein. | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | 0.948 |
HCDG_00230 | HCDG_02873 | C6H4M9 | C6H9J2 | Uncharacterized protein. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.571 |
HCDG_00230 | HCDG_02927 | C6H4M9 | C6H9P6 | Uncharacterized protein. | Histone deacetylase RpdA. | 0.571 |
HCDG_00230 | HCDG_03064 | C6H4M9 | C6HA33 | Uncharacterized protein. | Bromodomain and PHD finger-containing protein. | 0.984 |
HCDG_00230 | HCDG_04402 | C6H4M9 | C6HDX1 | Uncharacterized protein. | DOC family protein. | 0.767 |
HCDG_00230 | HCDG_04693 | C6H4M9 | C6HFH0 | Uncharacterized protein. | Histone acetylase complex subunit Paf400; Belongs to the PI3/PI4-kinase family. | 0.987 |
HCDG_00230 | HCDG_05983 | C6H4M9 | C6HIU9 | Uncharacterized protein. | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | 0.958 |
HCDG_00230 | HCDG_07280 | C6H4M9 | C6HMG4 | Uncharacterized protein. | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | 0.982 |
HCDG_02275 | HCDG_00230 | C6H774 | C6H4M9 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | Uncharacterized protein. | 0.948 |
HCDG_02275 | HCDG_02873 | C6H774 | C6H9J2 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.797 |
HCDG_02275 | HCDG_02927 | C6H774 | C6H9P6 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | Histone deacetylase RpdA. | 0.822 |
HCDG_02275 | HCDG_03064 | C6H774 | C6HA33 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | Bromodomain and PHD finger-containing protein. | 0.936 |
HCDG_02275 | HCDG_04402 | C6H774 | C6HDX1 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | DOC family protein. | 0.695 |
HCDG_02275 | HCDG_04693 | C6H774 | C6HFH0 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | Histone acetylase complex subunit Paf400; Belongs to the PI3/PI4-kinase family. | 0.952 |
HCDG_02275 | HCDG_04755 | C6H774 | C6HE88 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | Chromatin assembly factor 1 subunit C. | 0.644 |
HCDG_02873 | HCDG_00230 | C6H9J2 | C6H4M9 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Uncharacterized protein. | 0.571 |
HCDG_02873 | HCDG_02275 | C6H9J2 | C6H774 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | 0.797 |
HCDG_02873 | HCDG_02927 | C6H9J2 | C6H9P6 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Histone deacetylase RpdA. | 0.500 |
HCDG_02873 | HCDG_03064 | C6H9J2 | C6HA33 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Bromodomain and PHD finger-containing protein. | 0.648 |
HCDG_02873 | HCDG_04402 | C6H9J2 | C6HDX1 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | DOC family protein. | 0.642 |
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