Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCDG_00561 | HCDG_01362 | C6H1H9 | C6H4C3 | Uncharacterized protein. | Small GTPase. | 0.766 |
HCDG_00561 | HCDG_01577 | C6H1H9 | C6H816 | Uncharacterized protein. | Uncharacterized protein. | 0.773 |
HCDG_00561 | HCDG_01657 | C6H1H9 | C6H896 | Uncharacterized protein. | Rho1 GTPase. | 0.718 |
HCDG_00561 | HCDG_05319 | C6H1H9 | C6HFX9 | Uncharacterized protein. | APH domain-containing protein. | 0.609 |
HCDG_00561 | HCDG_07393 | C6H1H9 | C6HMS7 | Uncharacterized protein. | Rho3 GTPase. | 0.747 |
HCDG_00561 | HCDG_07556 | C6H1H9 | C6HLT7 | Uncharacterized protein. | Rac1 GTPase. | 0.767 |
HCDG_00561 | HCDG_07623 | C6H1H9 | C6HM04 | Uncharacterized protein. | Rho3 protein. | 0.514 |
HCDG_00561 | HCDG_07624 | C6H1H9 | C6HM05 | Uncharacterized protein. | Uncharacterized protein. | 0.514 |
HCDG_00839 | HCDG_00918 | C6H2A7 | C6H2I6 | Uncharacterized protein. | BZIP domain-containing protein. | 0.893 |
HCDG_00839 | HCDG_05319 | C6H2A7 | C6HFX9 | Uncharacterized protein. | APH domain-containing protein. | 0.600 |
HCDG_00918 | HCDG_00839 | C6H2I6 | C6H2A7 | BZIP domain-containing protein. | Uncharacterized protein. | 0.893 |
HCDG_00918 | HCDG_05319 | C6H2I6 | C6HFX9 | BZIP domain-containing protein. | APH domain-containing protein. | 0.765 |
HCDG_01362 | HCDG_00561 | C6H4C3 | C6H1H9 | Small GTPase. | Uncharacterized protein. | 0.766 |
HCDG_01362 | HCDG_01577 | C6H4C3 | C6H816 | Small GTPase. | Uncharacterized protein. | 0.508 |
HCDG_01362 | HCDG_01657 | C6H4C3 | C6H896 | Small GTPase. | Rho1 GTPase. | 0.764 |
HCDG_01362 | HCDG_05319 | C6H4C3 | C6HFX9 | Small GTPase. | APH domain-containing protein. | 0.609 |
HCDG_01362 | HCDG_07393 | C6H4C3 | C6HMS7 | Small GTPase. | Rho3 GTPase. | 0.773 |
HCDG_01362 | HCDG_07556 | C6H4C3 | C6HLT7 | Small GTPase. | Rac1 GTPase. | 0.491 |
HCDG_01362 | HCDG_07623 | C6H4C3 | C6HM04 | Small GTPase. | Rho3 protein. | 0.768 |
HCDG_01362 | HCDG_07624 | C6H4C3 | C6HM05 | Small GTPase. | Uncharacterized protein. | 0.758 |
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