STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCDG_05878Carnitine acetyl transferase. (839 aa)    
Predicted Functional Partners:
HCDG_06458
Carnitine acetyl transferase; Belongs to the carnitine/choline acetyltransferase family.
  
0.953
HCDG_00893
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.859
HCDG_01019
Acyl-CoA dehydrogenase.
   
 0.853
HCDG_05593
Acetoacetyl-CoA reductase.
   
 
 0.841
HCDG_00785
Acyl-CoA dehydrogenase.
   
 0.829
HCDG_04235
Acyl-CoA dehydrogenase; Belongs to the cytochrome b5 family.
   
 0.829
HCDG_09519
Glycerophosphodiesterase GDE1.
     
 0.821
HCDG_09520
Glycerophosphodiesterase GDE1.
     
 0.821
HCDG_06460
Uncharacterized protein.
   
 0.771
HCDG_02878
Acyl-CoA dehydrogenase.
   
 0.766
Your Current Organism:
Histoplasma capsulatum H143
NCBI taxonomy Id: 544712
Other names: Ajellomyces capsulatus H143, H. capsulatum H143
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.