Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCDG_01116 | HCDG_06313 | C6H334 | C6HJD2 | Alpha-1,3 glucan synthase. | Uncharacterized protein. | 0.578 |
HCDG_02946 | HCDG_06313 | C6H9R5 | C6HJD2 | Uncharacterized protein. | Uncharacterized protein. | 0.578 |
HCDG_02946 | HCDG_06606 | C6H9R5 | C6HK75 | Uncharacterized protein. | Uncharacterized protein. | 0.462 |
HCDG_02946 | HCDG_06634 | C6H9R5 | C6HKA3 | Uncharacterized protein. | Uncharacterized protein. | 0.462 |
HCDG_02946 | HCDG_07803 | C6H9R5 | C6HNM2 | Uncharacterized protein. | Alpha-(1,4)-amylase. | 0.531 |
HCDG_02946 | HCDG_07804 | C6H9R5 | C6HNM3 | Uncharacterized protein. | Alpha-(1,4)-amylase. | 0.531 |
HCDG_02946 | HCDG_08115 | C6H9R5 | C6HPI4 | Uncharacterized protein. | Isochorismatase family. | 0.462 |
HCDG_02948 | HCDG_05999 | C6H9R7 | C6HIW5 | Alpha-amylase. | Taka-amylase A. | 0.836 |
HCDG_02948 | HCDG_06313 | C6H9R7 | C6HJD2 | Alpha-amylase. | Uncharacterized protein. | 0.578 |
HCDG_02948 | HCDG_06606 | C6H9R7 | C6HK75 | Alpha-amylase. | Uncharacterized protein. | 0.462 |
HCDG_02948 | HCDG_06634 | C6H9R7 | C6HKA3 | Alpha-amylase. | Uncharacterized protein. | 0.462 |
HCDG_02948 | HCDG_07803 | C6H9R7 | C6HNM2 | Alpha-amylase. | Alpha-(1,4)-amylase. | 0.799 |
HCDG_02948 | HCDG_07804 | C6H9R7 | C6HNM3 | Alpha-amylase. | Alpha-(1,4)-amylase. | 0.799 |
HCDG_02948 | HCDG_08115 | C6H9R7 | C6HPI4 | Alpha-amylase. | Isochorismatase family. | 0.462 |
HCDG_05268 | HCDG_06313 | C6HFS8 | C6HJD2 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Uncharacterized protein. | 0.624 |
HCDG_05999 | HCDG_02948 | C6HIW5 | C6H9R7 | Taka-amylase A. | Alpha-amylase. | 0.836 |
HCDG_05999 | HCDG_06313 | C6HIW5 | C6HJD2 | Taka-amylase A. | Uncharacterized protein. | 0.578 |
HCDG_05999 | HCDG_07803 | C6HIW5 | C6HNM2 | Taka-amylase A. | Alpha-(1,4)-amylase. | 0.794 |
HCDG_05999 | HCDG_07804 | C6HIW5 | C6HNM3 | Taka-amylase A. | Alpha-(1,4)-amylase. | 0.794 |
HCDG_06313 | HCDG_01116 | C6HJD2 | C6H334 | Uncharacterized protein. | Alpha-1,3 glucan synthase. | 0.578 |
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