STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCDG_06940mRNA cleavage and polyadenylation specificity factor complex subunit. (569 aa)    
Predicted Functional Partners:
HCDG_02292
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.980
HCDG_07671
Endoribonuclease ysh-1.
   
 0.980
HCDG_01441
Polyadenylation factor subunit 2.
    
 0.978
HCDG_03128
mRNA 3'-end-processing protein yth1.
    
 0.978
HCDG_05352
Cleavage factor two protein 1.
    
 0.978
HCDG_08711
Uncharacterized protein.
    
 0.977
HCDG_08525
mRNA 3'-end-processing protein rna14.
    
 0.977
HCDG_09189
Uncharacterized protein.
    
 0.945
HCDG_02881
Transcription/RNA-processing factor Ssu72.
   
 
 0.941
HCDG_06808
WD40 domain-containing protein.
   
 
 0.941
Your Current Organism:
Histoplasma capsulatum H143
NCBI taxonomy Id: 544712
Other names: Ajellomyces capsulatus H143, H. capsulatum H143
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.