STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCDG_07334TRAF-type zinc finger protein. (474 aa)    
Predicted Functional Partners:
HCDG_08935
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.996
HCDG_00951
Polyubiquitin.
    
 0.983
HCDG_01500
BZIP domain-containing protein.
    
 0.967
HCDG_03585
Ubiquitin/79aa fusion protein.
    
 0.967
HCDG_05155
Glycogen synthase kinase; Belongs to the protein kinase superfamily.
    
 0.964
HCDG_01268
Uncharacterized protein.
    
 0.956
HCDG_04773
Endosomal cargo receptor.
   
 0.938
HCDG_05252
Uncharacterized protein.
   
 0.938
HCDG_01217
Ubiquitin-conjugating enzyme.
    
 0.917
HCDG_01847
AN1 zinc finger protein.
    
  0.917
Your Current Organism:
Histoplasma capsulatum H143
NCBI taxonomy Id: 544712
Other names: Ajellomyces capsulatus H143, H. capsulatum H143
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.