STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCL91060.1Hypothetical protein. (164 aa)    
Predicted Functional Partners:
fixL_3
Sensor protein FixL.
  
    0.592
mprA_2
Response regulator MprA.
       0.588
gsiB
Glutathione-binding protein GsiB precursor.
       0.588
dorA_2
Dimethyl sulfoxide/trimethylamine N-oxide reductase precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.584
OCL91056.1
Hypothetical protein.
       0.584
OCL91054.1
Hypothetical protein.
       0.419
Your Current Organism:
Arcobacter thereius
NCBI taxonomy Id: 544718
Other names: A. thereius, Aliiarcobacter thereius, Arcobacter sp. 16389, Arcobacter sp. 16695-3, Arcobacter sp. R-36845, Arcobacter sp. R-36855, Arcobacter thereius Houf et al. 2009, CCUG 56902, DSM 23385, LMG 24486, LMG:24486, strain 16389
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.