STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY84788.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)    
Predicted Functional Partners:
APY87614.1
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
APY84786.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.987
APY84787.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.982
APY91345.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.961
APY90727.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.957
APY85056.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.956
APY88295.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.954
APY88153.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.953
APY90799.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.950
APY84926.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.949
Your Current Organism:
Streptomyces silaceus
NCBI taxonomy Id: 545123
Other names: DSM 41861, LDDC 6638-99, NRRL B-24166, S. silaceus, Streptomyces silaceus Labeda et al. 2009, Streptomyces sp. NRRL B-24166
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.