STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000246895_02554Unannotated protein. (115 aa)    
Predicted Functional Partners:
GCA_000246895_02553
Unannotated protein.
    
0.957
GCA_000246895_02552
Unannotated protein.
 
     0.796
GCA_000246895_02840
Unannotated protein.
  
     0.549
GCA_000246895_02726
Unannotated protein.
  
     0.497
GCA_000246895_03551
Unannotated protein.
  
     0.434
Your Current Organism:
Clostridium arbusti
NCBI taxonomy Id: 545243
Other names: C. arbusti SL206, Clostridium arbusti SL206, Clostridium arbusti str. SL206, Clostridium arbusti strain SL206, Clostridium sp. SL206
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.