STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000246895_02987Unannotated protein. (250 aa)    
Predicted Functional Partners:
GCA_000246895_02988
Unannotated protein.
 
 0.998
GCA_000246895_02986
Unannotated protein.
 
  
 
0.968
GCA_000246895_03164
Unannotated protein.
 
 0.963
GCA_000246895_03163
Unannotated protein.
 
 0.938
GCA_000246895_02991
Unannotated protein.
 
   
 0.798
GCA_000246895_03165
Unannotated protein.
  
  
 
0.773
GCA_000246895_02990
Unannotated protein.
       0.760
GCA_000246895_02992
Unannotated protein.
     
 0.754
GCA_000246895_02989
Unannotated protein.
       0.746
GCA_000246895_02985
Unannotated protein.
       0.722
Your Current Organism:
Clostridium arbusti
NCBI taxonomy Id: 545243
Other names: C. arbusti SL206, Clostridium arbusti SL206, Clostridium arbusti str. SL206, Clostridium arbusti strain SL206, Clostridium sp. SL206
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.