STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000246895_03442Unannotated protein. (319 aa)    
Predicted Functional Partners:
GCA_000246895_00395
Unannotated protein.
 0.997
GCA_000246895_00392
Unannotated protein.
  
 0.972
GCA_000246895_02921
Unannotated protein.
 
 0.961
GCA_000246895_00398
Unannotated protein.
     
 0.829
GCA_000246895_01698
Unannotated protein.
   
 
 0.790
GCA_000246895_03404
Unannotated protein.
  
 0.787
GCA_000246895_00212
Unannotated protein.
   
 
 0.775
GCA_000246895_00584
Unannotated protein.
  
 0.766
GCA_000246895_01394
Unannotated protein.
   
 
 0.707
GCA_000246895_01395
Unannotated protein.
   
 
 0.707
Your Current Organism:
Clostridium arbusti
NCBI taxonomy Id: 545243
Other names: C. arbusti SL206, Clostridium arbusti SL206, Clostridium arbusti str. SL206, Clostridium arbusti strain SL206, Clostridium sp. SL206
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.