STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377845_00397Unannotated protein. (487 aa)    
Predicted Functional Partners:
GCA_000377845_00839
Unannotated protein.
 
 
 0.995
GCA_000377845_00053
Unannotated protein.
 
  
 0.983
GCA_000377845_02767
Unannotated protein.
     
 0.930
GCA_000377845_00396
Unannotated protein.
       0.724
GCA_000377845_00395
Unannotated protein.
       0.718
GCA_000377845_01115
Unannotated protein.
 
 
  
 0.561
GCA_000377845_00237
Unannotated protein.
     
 0.499
GCA_000377845_00398
Unannotated protein.
  
    0.480
GCA_000377845_00393
Unannotated protein.
     
 0.430
GCA_000377845_01384
Unannotated protein.
    
 0.420
Your Current Organism:
Thioalkalivibrio sp. AKL11
NCBI taxonomy Id: 545264
Other names: T. sp. AKL11
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.