STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377845_02070Unannotated protein. (697 aa)    
Predicted Functional Partners:
GCA_000377845_02574
Unannotated protein.
  
 
 
 0.869
GCA_000377845_02069
Unannotated protein.
       0.812
GCA_000377845_02068
Unannotated protein.
  
    0.677
GCA_000377845_00041
Unannotated protein.
  
    0.636
GCA_000377845_02464
Unannotated protein.
 
   
 0.587
GCA_000377845_00047
Unannotated protein.
    
 
 0.533
GCA_000377845_01476
Unannotated protein.
 
  
 0.496
GCA_000377845_01287
Unannotated protein.
 
    0.493
GCA_000377845_01120
Unannotated protein.
 
  
 0.489
GCA_000377845_02067
Unannotated protein.
       0.479
Your Current Organism:
Thioalkalivibrio sp. AKL11
NCBI taxonomy Id: 545264
Other names: T. sp. AKL11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.