STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377785_00082Unannotated protein. (247 aa)    
Predicted Functional Partners:
GCA_000377785_00080
Unannotated protein.
  
  
 0.858
GCA_000377785_00084
Unannotated protein.
 
  
 0.834
GCA_000377785_00083
Unannotated protein.
  
  
 0.811
GCA_000377785_00085
Unannotated protein.
 
   
 0.711
GCA_000377785_00081
Unannotated protein.
       0.694
GCA_000377785_00514
Unannotated protein.
  
   0.638
GCA_000377785_00086
Unannotated protein.
       0.628
GCA_000377785_00087
Unannotated protein.
       0.619
GCA_000377785_00298
Unannotated protein.
  
   0.607
GCA_000377785_00854
Unannotated protein.
   
  
 0.607
Your Current Organism:
Thioalkalivibrio sp. ALJ24
NCBI taxonomy Id: 545276
Other names: T. sp. ALJ24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.