STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377785_00519Unannotated protein. (266 aa)    
Predicted Functional Partners:
GCA_000377785_00520
Unannotated protein.
  
    0.705
GCA_000377785_00195
Unannotated protein.
 
     0.676
GCA_000377785_00518
Unannotated protein.
       0.675
GCA_000377785_00521
Unannotated protein.
       0.640
GCA_000377785_01814
Unannotated protein.
  
     0.618
GCA_000377785_00560
Unannotated protein.
  
     0.597
GCA_000377785_01892
Unannotated protein.
  
     0.567
GCA_000377785_01233
Unannotated protein.
  
     0.534
GCA_000377785_00517
Unannotated protein.
       0.501
GCA_000377785_00516
Unannotated protein.
       0.484
Your Current Organism:
Thioalkalivibrio sp. ALJ24
NCBI taxonomy Id: 545276
Other names: T. sp. ALJ24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.