STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377785_02103Unannotated protein. (149 aa)    
Predicted Functional Partners:
GCA_000377785_01887
Unannotated protein.
 
    0.767
GCA_000377785_00993
Unannotated protein.
 
     0.761
GCA_000377785_00757
Unannotated protein.
  
     0.752
GCA_000377785_01886
Unannotated protein.
 
    0.739
GCA_000377785_00353
Unannotated protein.
  
     0.728
GCA_000377785_01764
Unannotated protein.
  
     0.722
GCA_000377785_01871
Unannotated protein.
  
     0.694
GCA_000377785_01692
Unannotated protein.
  
     0.687
GCA_000377785_00095
Unannotated protein.
 
     0.657
GCA_000377785_00512
Unannotated protein.
 
     0.657
Your Current Organism:
Thioalkalivibrio sp. ALJ24
NCBI taxonomy Id: 545276
Other names: T. sp. ALJ24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.