STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377785_02554Unannotated protein. (232 aa)    
Predicted Functional Partners:
GCA_000377785_02552
Unannotated protein.
  
  
 0.881
GCA_000377785_02553
Unannotated protein.
 
  
 0.863
GCA_000377785_01226
Unannotated protein.
 
  
 0.800
GCA_000377785_00555
Unannotated protein.
    0.704
GCA_000377785_02555
Unannotated protein.
       0.681
GCA_000377785_00639
Unannotated protein.
  
    0.672
GCA_000377785_00592
Unannotated protein.
   
    0.644
GCA_000377785_00589
Unannotated protein.
   
    0.639
GCA_000377785_00579
Unannotated protein.
   
    0.629
GCA_000377785_02037
Unannotated protein.
  
     0.542
Your Current Organism:
Thioalkalivibrio sp. ALJ24
NCBI taxonomy Id: 545276
Other names: T. sp. ALJ24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.