STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377785_02650Unannotated protein. (607 aa)    
Predicted Functional Partners:
GCA_000377785_02663
Unannotated protein.
  
  
  0.857
GCA_000377785_01524
Unannotated protein.
  
 
 0.835
GCA_000377785_00690
Unannotated protein.
   
 0.832
GCA_000377785_01213
Unannotated protein.
   
 
 0.822
GCA_000377785_02560
Unannotated protein.
    
 0.818
GCA_000377785_01799
Unannotated protein.
    
 0.784
GCA_000377785_01800
Unannotated protein.
  
  
 
0.758
GCA_000377785_01048
Unannotated protein.
  
  
 
0.757
GCA_000377785_02310
Unannotated protein.
  
  
 
0.749
GCA_000377785_02653
Unannotated protein.
 
     0.732
Your Current Organism:
Thioalkalivibrio sp. ALJ24
NCBI taxonomy Id: 545276
Other names: T. sp. ALJ24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.